ERX2075297
Illumina HiSeq 3000 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Mitotic cycle 17
NA
NA

Attributes by original data submitter

Sample

ENA first public
2017-07-13
ENA last update
2017-07-12
ENA-CHECKLIST
ERC000011
External Id
SAMEA104140696
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:03:01Z
INSDC last update
2017-07-12T10:03:58Z
INSDC status
public
Submitter Id
A716_H3K27ac_st17_EzTS_shifted_rep1
common name
fruit fly
dev stage
embryos st 17
sample name
A716_H3K27ac_st17_EzTS_shifted_rep1

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra

Sequencing Platform

instrument_model
Illumina HiSeq 3000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
22129597
Reads aligned (%)
80.5
Duplicates removed (%)
52.4
Number of peaks
3169 (qval < 1E-05)

dm3

Number of total reads
22129597
Reads aligned (%)
80.8
Duplicates removed (%)
51.2
Number of peaks
3821 (qval < 1E-05)

Base call quality data from DBCLS SRA