Curated Sample Data


Genome
dm3
Antigen Class
Histone
Antigen
H3K27ac
Cell type Class
Embryo
Cell type
20-24h embryos

Cell type information


NA
NA

Attributes by Original Data Submitter


Alias
A716_H3K27ac_st17_EzKD_rep1
Description
H3K27ac ChIP (Diagenode, C15410194, A1862D) corresponding Input A716_Input_st17_EzKD_rep1
ENA checklist
ERC000011
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:03:01Z
INSDC last update
2017-07-12T10:13:51Z
INSDC status
public
SRA accession
ERS1799712
Sample Name
ERS1799712
Title
H3K27ac_st17_EzKD_rep1
dev_stage
embryos st 17

Metadata from Sequence Read Archive

Library Description


library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra

Platform Information


instrument_model
Illumina HiSeq 3000

External Database Query

Logs in read processing pipeline


Number of total reads
29054256
Reads aligned (%)
87.3
Duplicates removed (%)
43.2
Number of peaks
4459 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA