Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
LNCAP
Primary Tissue
Prostate
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

Alias
CHIP_CBPP300_2
Description
Androgen Receptor IP under starvation conditions
ENA checklist
ERC000011
INSDC center alias
GENENTECH INC.
INSDC center name
GENENTECH INC.
INSDC first public
2017-12-31T17:02:38Z
INSDC last update
2017-05-23T01:10:51Z
INSDC status
public
SRA accession
ERS1755480
Sample Name
ERS1755480
Title
01_2660Genen_LNCaP_starve_AR

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

hg19

Number of total reads
47721286
Reads aligned (%)
74.8
Duplicates removed (%)
12.8
Number of peaks
2188 (qval < 1E-05)

hg38

Number of total reads
47721286
Reads aligned (%)
76.6
Duplicates removed (%)
11.5
Number of peaks
2555 (qval < 1E-05)

Base call quality data from DBCLS SRA