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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: NCI-H1299
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
ERX1974192
Illumina HiSeq 2500 sequencing; ChIP-seq of H1299 cells stably transfected with empty vector or the p53 mutant R273H
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Lung
Cell type
NCI-H1299
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Non-Small Cell
Attributes by original data submitter
Sample
ENA first public
2017-04-16
ENA last update
2017-04-06
ENA-CHECKLIST
ERC000011
External Id
SAMEA103959877
INSDC center alias
VCU
INSDC center name
Virginia Commonwealth University
INSDC first public
2017-04-16T17:01:30Z
INSDC last update
2017-04-06T15:43:01Z
INSDC status
public
Submitter Id
E-MTAB-5653:Vector p53-1
broker name
ArrayExpress
cell line
NCI-H1299
common name
human
genotype
pcmv Bam
sample name
E-MTAB-5653:Vector p53-1
Sequenced DNA Library
library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests
Sequencing Platform
instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
16560317
Reads aligned (%)
60.7
Duplicates removed (%)
6.0
Number of peaks
1341 (qval < 1E-05)
hg19
Number of total reads
16560317
Reads aligned (%)
60.2
Duplicates removed (%)
8.3
Number of peaks
1392 (qval < 1E-05)
Base call quality data from
DBCLS SRA