Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Embryonic cells
NA
NA

Attributes by original data submitter

Sample

Alias
Goat_IgG_sc-2028_wild-type-mES_Batch-2
ENA checklist
ERC000011
INSDC center alias
KI-BN
INSDC center name
Department of Biosciences and Nutrition, Karolinska Institutet, Sweden
INSDC first public
2017-05-04T17:01:35Z
INSDC last update
2017-03-30T15:04:29Z
INSDC status
public
SRA accession
ERS1642934
Sample Name
ERS1642934
Title
Goat IgG ChIP-seq sample
cell_line
mouse embryonic cell

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 4000

mm10

Number of total reads
31414869
Reads aligned (%)
96.6
Duplicates removed (%)
18.2
Number of peaks
466 (qval < 1E-05)

mm9

Number of total reads
31414869
Reads aligned (%)
96.3
Duplicates removed (%)
18.2
Number of peaks
473 (qval < 1E-05)

Base call quality data from DBCLS SRA