Curated Sample Data
- Genome
- mm9
- Antigen Class
- Input control
- Antigen
- Input control
- Cell type Class
- Embryo
- Cell type
- Embryonic cells
Cell type information
- NA
- NA
Attributes by Original Data Submitter
- Alias
- Rabbit_IgG_sc-2027_Dnmt-TKO-mES_Batch-1
- ENA checklist
- ERC000011
- INSDC center alias
- KI-BN
- INSDC center name
- Department of Biosciences and Nutrition, Karolinska Institutet, Sweden
- INSDC first public
- 2017-05-04T17:01:35Z
- INSDC last update
- 2017-03-30T15:04:29Z
- INSDC status
- public
- SRA accession
- ERS1642932
- Sample Name
- ERS1642932
- Title
- Rabbit IgG ChIP-seq sample
- cell_line
- mouse embryonic cell deficient in Dnmt1, Dnmt3a and Dnmt3b
Metadata from Sequence Read Archive
Library Description
- library_name
- unspecified
- library_strategy
- ChIP-Seq
- library_source
- GENOMIC
- library_selection
- ChIP
Platform Information
- instrument_model
- Illumina HiSeq 4000
- Number of total reads
- 43830435
- Reads aligned (%)
- 97.3
- Duplicates removed (%)
- 21.7
- Number of peaks
- 565 (qval < 1E-05)