Antigen

Antigen Class

TFs and others

Antigen

Klf4

Cell type

Cell type Class

Embryo

Cell type

Embryonic cells

NA

NA

Sample

Alias

Klf4_AF3158_Dnmt-TKO-mES_Replicate-1_Batch-1

ENA checklist

ERC000011

INSDC center alias

KI-BN

INSDC center name

Department of Biosciences and Nutrition, Karolinska Institutet, Sweden

INSDC first public

2017-05-04T17:01:35Z

INSDC last update

2017-03-30T15:04:29Z

INSDC status

public

SRA accession

ERS1642917

Sample Name

ERS1642917

Title

Klf4 ChIP-seq sample

cell_line

mouse embryonic cell deficient in Dnmt1, Dnmt3a and Dnmt3b

Sequenced DNA Library

library_name

unspecified

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 4000

mm10

Number of total reads

88325639

Reads aligned (%)

97.7

Duplicates removed (%)

20.5

Number of peaks

30621 (qval < 1E-05)

mm9

Number of total reads

88325639

Reads aligned (%)

97.5

Duplicates removed (%)

20.5

Number of peaks

30690 (qval < 1E-05)