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For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: Mitotic cycle 9
ATCC
MeSH
RIKEN BRC
ERX1918290
Illumina HiSeq 2000 sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Embryo
Cell type
Mitotic cycle 9
NA
NA
Attributes by original data submitter
Sample
ENA-CHECKLIST
ERC000011
ENA-FIRST-PUBLIC
2017-07-13
ENA-LAST-UPDATE
2017-07-12
External Id
SAMEA100684168
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:02:59Z
INSDC last update
2017-07-12T09:57:48Z
INSDC status
public
Submitter Id
H3K27me3_before_c9_WT_rep3_run2
common name
fruit fly
dev_stage
embryos before cycle 9
sample name
H3K27me3_before_c9_WT_rep3_run2
Sequenced DNA Library
library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
WGA - TruSeq
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
48530619
Reads aligned (%)
8.3
Duplicates removed (%)
84.3
Number of peaks
1071 (qval < 1E-05)
dm3
Number of total reads
48530619
Reads aligned (%)
16.0
Duplicates removed (%)
91.4
Number of peaks
1021 (qval < 1E-05)
Base call quality data from
DBCLS SRA