Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

ENA first public
2017-07-13
ENA last update
2017-07-12
ENA-CHECKLIST
ERC000011
External Id
SAMEA20413168
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:02:58Z
INSDC last update
2017-07-12T09:56:30Z
INSDC status
public
Submitter Id
580_H3K4me1_c14_WT_rep2
common name
fruit fly
dev stage
embryos
sample name
580_H3K4me1_c14_WT_rep2

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra

Sequencing Platform

instrument_model
Illumina HiSeq 2500

dm6

Number of total reads
10762477
Reads aligned (%)
61.5
Duplicates removed (%)
22.1
Number of peaks
1636 (qval < 1E-05)

dm3

Number of total reads
10762477
Reads aligned (%)
61.9
Duplicates removed (%)
21.3
Number of peaks
1463 (qval < 1E-05)

Base call quality data from DBCLS SRA