ERX1818283
NextSeq 500 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Mitotic cycle
NA
NA

Attributes by original data submitter

Sample

ENA first public
2017-07-13
ENA last update
2017-07-12
ENA-CHECKLIST
ERC000011
External Id
SAMEA20411668
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:02:58Z
INSDC last update
2017-07-12T09:56:30Z
INSDC status
public
Submitter Id
527_H3K4me1_c14_WT_rep1
common name
fruit fly
dev stage
embryos cycle 14 - ZGA
sample name
527_H3K4me1_c14_WT_rep1

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
19023509
Reads aligned (%)
90.4
Duplicates removed (%)
29.9
Number of peaks
3549 (qval < 1E-05)

dm3

Number of total reads
19023509
Reads aligned (%)
90.9
Duplicates removed (%)
28.8
Number of peaks
3784 (qval < 1E-05)

Base call quality data from DBCLS SRA