Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Embryo
Cell type
Mitotic cycle 14
NA
NA

Attributes by original data submitter

Sample

Alias
175_H3K27me3_c14_WT_rep2
Description
H3K27me3 ChIP (Diagenode, C15410195 A1811-001P) corresponding Input 175_Input_c14_WT_rep2
ENA checklist
ERC000011
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:02:58Z
INSDC last update
2017-07-12T09:56:30Z
INSDC status
public
SRA accession
ERS1465323
Sample Name
ERS1465323
Title
175_H3K27me3_c14_WT_rep2
dev_stage
embryos

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra

Sequencing Platform

instrument_model
Illumina HiSeq 2500

dm3

Number of total reads
8868123
Reads aligned (%)
48.3
Duplicates removed (%)
7.8
Number of peaks
2902 (qval < 1E-05)

dm6

Number of total reads
8868123
Reads aligned (%)
47.9
Duplicates removed (%)
9.1
Number of peaks
1226 (qval < 1E-05)

Base call quality data from DBCLS SRA