ERX1818268
NextSeq 500 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Mitotic cycle 9-13
NA
NA

Attributes by original data submitter

Sample

ENA first public
2017-07-13
ENA last update
2017-07-12
ENA-CHECKLIST
ERC000011
External Id
SAMEA20400418
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2017-07-13T17:03:06Z
INSDC last update
2017-07-12T09:56:30Z
INSDC status
public
Submitter Id
487_Input_c9-13_WT_rep4
common name
fruit fly
dev stage
embryos cycle 9-13
sample name
487_Input_c9-13_WT_rep4

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
30282258
Reads aligned (%)
95.5
Duplicates removed (%)
14.6
Number of peaks
2160 (qval < 1E-05)

dm3

Number of total reads
30282258
Reads aligned (%)
96.2
Duplicates removed (%)
12.5
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA