Antigen

Antigen Class

TFs and others

Antigen

GMEB2

Cell type

Cell type Class

Digestive tract

Cell type

LoVo

Primary Tissue

Colon

Tissue Diagnosis

Adenocarcinoma

Sample

Alias

LoVo_GMEB2_Rabbit3

Description

Chromatin immuno-precipitation of GMEB2 transcription factor from LoVo cell line using Abcam ab50592 - antibody.

INSDC center alias

KI-BN

INSDC center name

Department of Biosciences and Nutrition, Karolinska Institutet, Sweden

INSDC first public

2013-01-18T09:17:04Z

INSDC last update

2012-10-18T10:53:27Z

INSDC status

public

SRA accession

ERS182608

Sample Name

ERS182608

Title

LoVo_GMEB2_Rabbit

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads

5498479

Reads aligned (%)

68.4

Duplicates removed (%)

18.2

Number of peaks

1404 (qval < 1E-05)

hg38

Number of total reads

5498479

Reads aligned (%)

69.9

Duplicates removed (%)

17.4

Number of peaks

1391 (qval < 1E-05)