Antigen

Antigen Class

TFs and others

Antigen

E2F7

Cell type

Cell type Class

Digestive tract

Cell type

LoVo

Primary Tissue

Colon

Tissue Diagnosis

Adenocarcinoma

Sample

Alias

ChIP-seq_LoVo_E2F71

Description

Chromatin immunoprecipitation of transcription factor E2F7 from LoVo cell line LoVo_E2F7

INSDC center alias

KI-BN

INSDC center name

Department of Biosciences and Nutrition, Karolinska Institutet, Sweden

INSDC first public

2013-01-18T09:17:04Z

INSDC last update

2012-10-17T21:06:27Z

INSDC status

public

SRA accession

ERS182602

Sample Name

ERS182602

Title

ChIP-seq_LoVo_E2F7

Sequenced DNA Library

library_name

ChIP-seq_LoVo_E2F7

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg19

Number of total reads

33103524

Reads aligned (%)

63.5

Duplicates removed (%)

19.2

Number of peaks

3498 (qval < 1E-05)

hg38

Number of total reads

33103524

Reads aligned (%)

64.6

Duplicates removed (%)

18.3

Number of peaks

3653 (qval < 1E-05)