Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

External Id
SAMEA1464065
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2012-07-18T10:53:21Z
INSDC last update
2018-03-08T15:24:45Z
INSDC status
public
Submitter Id
m_Th1_MBD_P-sc-2010-03-05-3428
common name
house mouse
sample name
m_Th1_MBD_P-sc-2010-03-05-3428

Sequenced DNA Library

library_name
54906
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Standard

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
9993226
Reads aligned (%)
93.7
Duplicates removed (%)
36.6
Number of peaks
72341 (qval < 1E-05)

mm9

Number of total reads
9993226
Reads aligned (%)
92.8
Duplicates removed (%)
36.8
Number of peaks
72226 (qval < 1E-05)

Base call quality data from DBCLS SRA