ERX1268196
Illumina Genome Analyzer IIx sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2015-12-24
ENA last update
2015-12-17
ENA-CHECKLIST
ERC000011
External Id
SAMEA3716450
INSDC center alias
CSF
INSDC center name
CSF
INSDC first public
2015-12-24T17:01:50Z
INSDC last update
2015-12-17T16:36:18Z
INSDC status
public
Submitter Id
sororin_G2_10619
common name
human
sample name
sororin_G2_10619

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40588894
Reads aligned (%)
92.0
Duplicates removed (%)
33.5
Number of peaks
8102 (qval < 1E-05)

hg19

Number of total reads
40588894
Reads aligned (%)
91.1
Duplicates removed (%)
35.6
Number of peaks
8045 (qval < 1E-05)

Base call quality data from DBCLS SRA