Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMC3

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

Alias
Smc3_earlyS_9328
Description
Smc3_earlyS_9328
ENA checklist
ERC000011
INSDC center name
CSF
INSDC first public
2015-12-24T17:01:50Z
INSDC last update
2015-12-17T16:36:18Z
INSDC status
public
SRA accession
ERS1023588
Sample Name
ERS1023588
Title
Smc3_earlyS_9328

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
17512717
Reads aligned (%)
74.8
Duplicates removed (%)
15.3
Number of peaks
31081 (qval < 1E-05)

hg38

Number of total reads
17512717
Reads aligned (%)
76.3
Duplicates removed (%)
14.3
Number of peaks
31166 (qval < 1E-05)

Base call quality data from DBCLS SRA