ERX1268188
Illumina Genome Analyzer IIx sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2015-12-24
ENA last update
2015-12-17
ENA-CHECKLIST
ERC000011
External Id
SAMEA3716437
INSDC center alias
CSF
INSDC center name
CSF
INSDC first public
2015-12-24T17:01:50Z
INSDC last update
2015-12-17T16:36:18Z
INSDC status
public
Submitter Id
sororin_earlyS_9327
common name
human
sample name
sororin_earlyS_9327

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
19862925
Reads aligned (%)
78.1
Duplicates removed (%)
16.4
Number of peaks
5620 (qval < 1E-05)

hg19

Number of total reads
19862925
Reads aligned (%)
77.6
Duplicates removed (%)
17.4
Number of peaks
5876 (qval < 1E-05)

Base call quality data from DBCLS SRA