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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: NA
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
ERX1268187
Illumina HiSeq 2000 sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
No description
Cell type
NA
NA
NA
Attributes by original data submitter
Sample
ENA first public
2015-12-24
ENA last update
2015-12-17
ENA-CHECKLIST
ERC000011
External Id
SAMEA3716448
INSDC center alias
CSF
INSDC center name
CSF
INSDC first public
2015-12-24T17:01:50Z
INSDC last update
2015-12-17T16:36:18Z
INSDC status
public
Submitter Id
sororin_earlyS_19583
common name
human
sample name
sororin_earlyS_19583
Sequenced DNA Library
library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
184094802
Reads aligned (%)
91.0
Duplicates removed (%)
18.7
Number of peaks
36661 (qval < 1E-05)
hg19
Number of total reads
184094802
Reads aligned (%)
90.5
Duplicates removed (%)
20.0
Number of peaks
36151 (qval < 1E-05)
Base call quality data from
DBCLS SRA