Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Neural

Cell type

Neural Stem Cells

MeSH Description

Self-renewing cells that generate the main phenotypes of the nervous system in both the embryo and adult. Neural stem cells are precursors to both NEURONS and NEUROGLIA.

Sample

ENA first public

2017-01-06

ENA last update

2015-12-08

ENA-CHECKLIST

ERC000011

External Id

SAMEA3699128

INSDC center alias

The Francis Crick Institute

INSDC center name

The Francis Crick Institute

INSDC first public

2017-01-06T17:01:21Z

INSDC last update

2015-12-08T18:22:42Z

INSDC status

public

Submitter Id

Nipbl_rep1

cell type

neural stem cells

common name

house mouse

sample name

Nipbl_rep1

Sequenced DNA Library

library_name

Nipbl_rep1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Libraries were prepared from 10ng DNA using Illumina ChIP-Seq Sample Prep Kit

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

34971804

Reads aligned (%)

95.5

Duplicates removed (%)

22.7

Number of peaks

15974 (qval < 1E-05)

mm9

Number of total reads

34971804

Reads aligned (%)

95.3

Duplicates removed (%)

22.8

Number of peaks

15902 (qval < 1E-05)