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BigWig
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
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For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H4
wikigenes
PDBj
CellType: Salivary glands
ATCC
MeSH
RIKEN BRC
ERX101811
MOF, H4 and H4K16ac ChIP-seq experiments in D.melanogaster
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H4
Cell type
Cell type Class
Larvae
Cell type
Salivary glands
NA
NA
Attributes by original data submitter
Sample
ENA first public
2012-05-14
ENA last update
2018-03-08
External Id
SAMEA1322613
INSDC center alias
EMBL Heidelberg
INSDC center name
EMBL Heidelberg
INSDC first public
2012-05-14T11:50:36Z
INSDC last update
2018-03-08T15:47:02Z
INSDC status
public
Submitter Id
E-MTAB-911:H4_male_wt_reads
broker name
ArrayExpress
common name
fruit fly
developmental stage
3rd instar larva
genotype
wild_type
immunoprecipitate
anti-histoneH4
organism part
salivary gland
sample name
E-MTAB-911:H4_male_wt_reads
sex
male
Sequenced DNA Library
library_name
H4_male_wt_reads
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq purification protocol is detailed in Conrad et al.
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
13564190
Reads aligned (%)
93.6
Duplicates removed (%)
11.0
Number of peaks
0 (qval < 1E-05)
dm3
Number of total reads
13564190
Reads aligned (%)
93.7
Duplicates removed (%)
10.9
Number of peaks
0 (qval < 1E-05)
Base call quality data from
DBCLS SRA