Curated Sample Data


Genome
dm3
Antigen Class
Histone
Antigen
H4K16ac
Cell type Class
Larvae
Cell type
Salivary glands

Cell type information


NA
NA

Attributes by Original Data Submitter


Alias
E-MTAB-911:H4K16ac_male_wt_reads
Broker name
ArrayExpress
Description
Protocols: Drosophila larva were grown at 25 C
DevelopmentalStage
3rd instar larva
Genotype
wild_type
INSDC center alias
EMBL Heidelberg
INSDC center name
EMBL Heidelberg
INSDC first public
2012-05-14T11:50:36Z
INSDC last update
2018-03-08T15:47:02Z
INSDC status
public
Immunoprecipitate
anti-histoneH4K16ac
OrganismPart
salivary gland
SRA accession
ERS138509
Sample Name
ERS138509
Sex
male
Title
H4K16ac_male_wt_reads

Metadata from Sequence Read Archive

Library Description


library_name
H4K16ac_male_wt_reads
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq purification protocol is detailed in Conrad et al.

Platform Information


instrument_model
Illumina Genome Analyzer II

External Database Query

Logs in read processing pipeline


Number of total reads
12567533
Reads aligned (%)
92.5
Duplicates removed (%)
31.4
Number of peaks
7414 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA