Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
mof

Cell type

Cell type Class
Larvae
Cell type
Salivary glands
NA
NA

Attributes by original data submitter

Sample

ENA first public
2012-05-14
ENA last update
2018-03-08
External Id
SAMEA1322608
INSDC center alias
EMBL Heidelberg
INSDC center name
EMBL Heidelberg
INSDC first public
2012-05-14T11:50:35Z
INSDC last update
2018-03-08T15:47:02Z
INSDC status
public
Submitter Id
E-MTAB-911:MOF_male_wt_reads
broker name
ArrayExpress
common name
fruit fly
developmental stage
3rd instar larva
genotype
wild_type
immunoprecipitate
anti-MOF
organism part
salivary gland
sample name
E-MTAB-911:MOF_male_wt_reads
sex
male

Sequenced DNA Library

library_name
MOF_male_wt_reads
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq purification protocol is detailed in Conrad et al.

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm3

Number of total reads
9945648
Reads aligned (%)
76.6
Duplicates removed (%)
17.6
Number of peaks
9580 (qval < 1E-05)

dm6

Number of total reads
9945648
Reads aligned (%)
76.4
Duplicates removed (%)
17.7
Number of peaks
9681 (qval < 1E-05)

Base call quality data from DBCLS SRA