Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Mef2

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

Alias
MM-0002_Sample_0021
Description
Mef2 ChIP biological replicate 2
INSDC center alias
EMBL
INSDC center name
European Molecular Biology Laboratory
INSDC first public
2012-01-04T16:55:12Z
INSDC last update
2013-11-04T20:04:51Z
INSDC status
public
SRA accession
ERS025558
Sample Name
ERS025558
Title
ChIP Mef2 replicate 2

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
30754969
Reads aligned (%)
60.4
Duplicates removed (%)
37.6
Number of peaks
9256 (qval < 1E-05)

dm6

Number of total reads
30754969
Reads aligned (%)
53.2
Duplicates removed (%)
44.9
Number of peaks
4509 (qval < 1E-05)

Base call quality data from DBCLS SRA