Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Mef2

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

Alias
MM-0002_Sample_0019
Description
Mef2 BiTS-ChIP
INSDC center alias
EMBL
INSDC center name
European Molecular Biology Laboratory
INSDC first public
2012-01-04T16:55:12Z
INSDC last update
2013-11-04T20:04:51Z
INSDC status
public
SRA accession
ERS025556
Sample Name
ERS025556
Title
BiTS-ChIP Mef2

Sequenced DNA Library

library_name
BiTS_Mef2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Standard Solexa protocol

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

dm3

Number of total reads
26109729
Reads aligned (%)
58.1
Duplicates removed (%)
39.8
Number of peaks
6422 (qval < 1E-05)

dm6

Number of total reads
26109729
Reads aligned (%)
54.7
Duplicates removed (%)
43.0
Number of peaks
5801 (qval < 1E-05)

Base call quality data from DBCLS SRA