DRX144852
NextSeq 500 sequencing of SAMD00144946

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CAL-1
NA
NA

Attributes by original data submitter

Sample

sample_name
CAL1-RUNX2-Input
tissue_type
Cell line

Sequenced DNA Library

library_name
ChIP-RUNX2-input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
21147506
Reads aligned (%)
95.2
Duplicates removed (%)
27.9
Number of peaks
2910 (qval < 1E-05)

hg19

Number of total reads
21147506
Reads aligned (%)
94.7
Duplicates removed (%)
28.6
Number of peaks
2979 (qval < 1E-05)

Base call quality data from DBCLS SRA