Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TP53

Cell type

Cell type Class
Lung
Cell type
NCI-H1299
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Non-Small Cell

Attributes by original data submitter

Sample

sample_name
ChIP-seq (H1299 p53 IP)
cell_line
H1299

Sequenced DNA Library

library_name
ChIP-seq (H1299 p53 IP)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
29608136
Reads aligned (%)
23.7
Duplicates removed (%)
34.3
Number of peaks
4478 (qval < 1E-05)

hg38

Number of total reads
29608136
Reads aligned (%)
24.1
Duplicates removed (%)
33.6
Number of peaks
3971 (qval < 1E-05)

Base call quality data from DBCLS SRA