DRX135459
Illumina Genome Analyzer IIx sequencing of SAMD00131351

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
NCI-H1299
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Non-Small Cell

Attributes by original data submitter

Sample

sample_name
ChIP-seq (H1299 LacZ input)
cell_line
H1299

Sequenced DNA Library

library_name
ChIP-seq (H1299 lacZ input)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
29863220
Reads aligned (%)
83.1
Duplicates removed (%)
13.4
Number of peaks
259 (qval < 1E-05)

hg19

Number of total reads
29863220
Reads aligned (%)
82.3
Duplicates removed (%)
14.5
Number of peaks
334 (qval < 1E-05)

Base call quality data from DBCLS SRA