DRX113859
Illumina HiSeq 1500 sequencing of SAMD00108462

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CAL-1
NA
NA

Attributes by original data submitter

Sample

sample_name
CAL1-JQ1-Input
biomaterial_provider
Nagasaki University
cell_line
CAL1
cell_type
plasmacytoid dendritic cell

Sequenced DNA Library

library_name
CAL1-JQ1-Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
43709066
Reads aligned (%)
98.4
Duplicates removed (%)
3.7
Number of peaks
673 (qval < 1E-05)

hg19

Number of total reads
43709066
Reads aligned (%)
97.6
Duplicates removed (%)
5.2
Number of peaks
638 (qval < 1E-05)

Base call quality data from DBCLS SRA