Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

GM12878

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Sample

sample_name

Hs-GM12878-input_rep1

cell_line

GM12878

replicate

biological replicate 1

sex

female

Sequenced DNA Library

library_name

Hs-GM12878-input_rep1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 1500

hg38

Number of total reads

23479237

Reads aligned (%)

92.2

Duplicates removed (%)

0.7

Number of peaks

628 (qval < 1E-05)

hg19

Number of total reads

23479237

Reads aligned (%)

90.7

Duplicates removed (%)

0.8

Number of peaks

495 (qval < 1E-05)