DRX059623
Illumina HiSeq 2500 sequencing of SAMD00055696

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me2

Cell type

Cell type Class
Blood
Cell type
HB1119
NA
NA

Attributes by original data submitter

Sample

sample_name
0017_HB1119-fanChIP-H3K4me2
cell_line
HB1119

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
31957321
Reads aligned (%)
97.3
Duplicates removed (%)
3.4
Number of peaks
14567 (qval < 1E-05)

hg19

Number of total reads
31957321
Reads aligned (%)
96.7
Duplicates removed (%)
4.2
Number of peaks
14328 (qval < 1E-05)

Base call quality data from DBCLS SRA