DRX059608
Illumina HiSeq 2500 sequencing of SAMD00055681

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AFF1

Cell type

Cell type Class
Blood
Cell type
HB1119
NA
NA

Attributes by original data submitter

Sample

sample_name
0002_HB1119-fanChIP-AF4
cell_line
HB1119

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
25701675
Reads aligned (%)
82.7
Duplicates removed (%)
8.5
Number of peaks
2141 (qval < 1E-05)

hg19

Number of total reads
25701675
Reads aligned (%)
81.6
Duplicates removed (%)
11.5
Number of peaks
1839 (qval < 1E-05)

Base call quality data from DBCLS SRA