Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTNNB1

Cell type

Cell type Class
Digestive tract
Cell type
DLD-1
Primary Tissue
Colon
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
Bcatenin ChIP
cell_line
DLD-1
cell_type
Colon cancer cells

Sequenced DNA Library

library_name
Bcatenin ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
38549623
Reads aligned (%)
24.5
Duplicates removed (%)
74.5
Number of peaks
600 (qval < 1E-05)

hg38

Number of total reads
38549623
Reads aligned (%)
26.1
Duplicates removed (%)
73.0
Number of peaks
777 (qval < 1E-05)

Base call quality data from DBCLS SRA