Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ICE1

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

sample_name
NT_ICE1 IP
cell_line
HEK293T

Sequenced DNA Library

library_name
HEK293T_NT_ICE1_ChIPseq replicate3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
57528481
Reads aligned (%)
48.6
Duplicates removed (%)
50.1
Number of peaks
1148 (qval < 1E-05)

hg38

Number of total reads
57528481
Reads aligned (%)
50.2
Duplicates removed (%)
48.7
Number of peaks
1173 (qval < 1E-05)

Base call quality data from DBCLS SRA