DRX021253
Illumina HiSeq 1500 sequencing of SAMD00030144

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GRWD1

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
HeLa cells stably expressing HA-GRWD1
cell_line
HeLa

Sequenced DNA Library

library_name
HeLa HA-GRWD1 ChIP Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
29500331
Reads aligned (%)
99.5
Duplicates removed (%)
3.3
Number of peaks
315 (qval < 1E-05)

hg19

Number of total reads
29500331
Reads aligned (%)
99.0
Duplicates removed (%)
4.5
Number of peaks
360 (qval < 1E-05)

Base call quality data from DBCLS SRA