DRX021050
Illumina HiSeq 2500 sequencing of SAMD00019947

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

sample_name
HS5_no17_minus_input
cell_line
K562

Sequenced DNA Library

library_name
HS5_no17_minus_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
48786495
Reads aligned (%)
96.2
Duplicates removed (%)
3.9
Number of peaks
1505 (qval < 1E-05)

hg19

Number of total reads
48786495
Reads aligned (%)
95.0
Duplicates removed (%)
6.5
Number of peaks
1420 (qval < 1E-05)

Base call quality data from DBCLS SRA