Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
VMRC-LCD
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS014939
sample comment
VMRC-LCD lung adenocarcinoma cell lines; ChIPseq; whole cell extract DNA;

Sequenced DNA Library

library_name
VMRC-LCD input [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
20698019
Reads aligned (%)
51.5
Duplicates removed (%)
3.8
Number of peaks
1951 (qval < 1E-05)

hg19

Number of total reads
20698019
Reads aligned (%)
51.0
Duplicates removed (%)
4.6
Number of peaks
1932 (qval < 1E-05)

Base call quality data from DBCLS SRA