Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Lung
Cell type
NCI-H1819
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS014782
sample comment
H1819 lung adenocarcinoma cell lines; ChIPseq; anti-H3K4me1 (ab8895 GR114297-1, abcam);

Sequenced DNA Library

library_name
H1819 H3K4me1 [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
36181271
Reads aligned (%)
96.8
Duplicates removed (%)
3.9
Number of peaks
54850 (qval < 1E-05)

hg19

Number of total reads
36181271
Reads aligned (%)
96.3
Duplicates removed (%)
4.2
Number of peaks
54545 (qval < 1E-05)

Base call quality data from DBCLS SRA