DRX015291
H1819 H3K4me3 [ChIPseq]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Lung
Cell type
NCI-H1819
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS014781
sample comment
H1819 lung adenocarcinoma cell lines; ChIPseq; anti-H3K4me3 (ab1012 GR7751-1/GR80367-1, abcam);

Sequenced DNA Library

library_name
H1819 H3K4me3 [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
18785858
Reads aligned (%)
95.3
Duplicates removed (%)
20.4
Number of peaks
28946 (qval < 1E-05)

hg19

Number of total reads
18785858
Reads aligned (%)
95.0
Duplicates removed (%)
20.5
Number of peaks
28776 (qval < 1E-05)

Base call quality data from DBCLS SRA