DRX015269
H1648 input [ChIPseq]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
NCI-H1648
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS014759
sample comment
H1648 lung adenocarcinoma cell lines; ChIPseq; whole cell extract DNA;

Sequenced DNA Library

library_name
H1648 input [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
19324706
Reads aligned (%)
96.5
Duplicates removed (%)
6.0
Number of peaks
718 (qval < 1E-05)

hg19

Number of total reads
19324706
Reads aligned (%)
95.7
Duplicates removed (%)
7.3
Number of peaks
835 (qval < 1E-05)

Base call quality data from DBCLS SRA