DRX015251
H1299 input [ChIPseq]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
NCI-H1299
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Non-Small Cell

Attributes by original data submitter

Sample

sample_name
DRS014741
sample comment
H1299 lung adenocarcinoma cell lines; ChIPseq; whole cell extract DNA;

Sequenced DNA Library

library_name
H1299 input [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
12178785
Reads aligned (%)
92.0
Duplicates removed (%)
1.8
Number of peaks
268 (qval < 1E-05)

hg19

Number of total reads
12178785
Reads aligned (%)
91.1
Duplicates removed (%)
2.8
Number of peaks
514 (qval < 1E-05)

Base call quality data from DBCLS SRA