Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
A549
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

sample_name
DRS014723
sample comment
A549 lung adenocarcinoma cell lines; ChIPseq; whole cell extract DNA;

Sequenced DNA Library

library_name
A549 input [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
29388817
Reads aligned (%)
81.4
Duplicates removed (%)
13.0
Number of peaks
326 (qval < 1E-05)

hg19

Number of total reads
29388817
Reads aligned (%)
80.5
Duplicates removed (%)
13.5
Number of peaks
923 (qval < 1E-05)

Base call quality data from DBCLS SRA