Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Cardiovascular

Cell type

HUVEC

Primary Tissue

Umbilical Cord

Tissue Diagnosis

Normal

Sample

sample_name

DRS014287

age

newborn

biomaterial_provider

Lonza Walkersville, Inc (Walkersville, MD)

biomaterial_type

Primary Cell

catalog number

FC-0077

cause of death

Alive

cell ontology

endothelial cell of umbilical vein

cell ontology uri

http://purl.obolibrary.org/obo/CL_0002618

cell type abbreviation

HUVEC

cell_type

Human Umbilical Vein Endothelial Cells

collection_date

2013-05-01

donor_id

JTK017

ethnicity

Caucasian

health_state

alive

ihec ref

JTK017

label

IHEC29

lot number

3291

sample_type

Primary Cell

sex

male

tissue_type

the endothelium of blood vessels

total cell count

577500

total cell count unit

cell per mili-liter

viability (tripan blue exclusion)

93%

Sequenced DNA Library

library_name

WadaLab-IHEC29-INP1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Sequencing library was constructed following the Illumina protocol

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

46767454

Reads aligned (%)

99.1

Duplicates removed (%)

4.2

Number of peaks

1343 (qval < 1E-05)

hg19

Number of total reads

46767454

Reads aligned (%)

98.2

Duplicates removed (%)

5.5

Number of peaks

1365 (qval < 1E-05)