Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Cardiovascular

Cell type

HPAEC

Tissue

blood vessel

Lineage

mesoderm

Description

pulmonary artery endothelial cells.

Sample

sample_name

DRS014280

age

19

biomaterial_provider

Lonza Walkersville, Inc (Walkersville, MD)

biomaterial_type

Primary Cell

catalog number

FC-0077

cause of death

Anoxia

cell ontology

pulmonary artery endothelial cell

cell ontology uri

http://purl.obolibrary.org/obo/CL_1001568

cell type abbreviation

HPAEC

cell_type

Human Pulmonary Artery Endothelial Cells

collection_date

2013-03-01

donor_id

JTK010

ethnicity

African american

health_state

dead

ihec ref

JTK010

label

IHEC21

lot number

3227

sample_type

Primary Cell

sex

female

tissue_type

the endothelium of blood vessels

total cell count

670000

total cell count unit

cell per mili-liter

viability (tripan blue exclusion)

95%

Sequenced DNA Library

library_name

WadaLab-IHEC21-D1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Sequencing library was constructed following the Illumina protocol

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

44803703

Reads aligned (%)

99.3

Duplicates removed (%)

3.4

Number of peaks

1322 (qval < 1E-05)

hg19

Number of total reads

44803703

Reads aligned (%)

98.7

Duplicates removed (%)

4.6

Number of peaks

1351 (qval < 1E-05)