DRX013214
MCF7 WCE

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Breast
Cell type
MCF-7
Primary Tissue
Breast
Site of Extraction
Pleura
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS013013
sample comment
ChIP seq library. MCF-7 cell line, whole cell extract

Sequenced DNA Library

library_name
MCF7 WCE
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
24188980
Reads aligned (%)
77.5
Duplicates removed (%)
40.1
Number of peaks
310 (qval < 1E-05)

hg19

Number of total reads
24188980
Reads aligned (%)
76.9
Duplicates removed (%)
41.3
Number of peaks
372 (qval < 1E-05)

Base call quality data from DBCLS SRA