Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RAD21

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS013000
sample comment
ChIP seq library. HeLa cell line, Rad21 IP

Sequenced DNA Library

library_name
HeLa Rad21
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
48240388
Reads aligned (%)
78.7
Duplicates removed (%)
17.3
Number of peaks
55294 (qval < 1E-05)

hg38

Number of total reads
48240388
Reads aligned (%)
80.9
Duplicates removed (%)
15.8
Number of peaks
55966 (qval < 1E-05)

Base call quality data from DBCLS SRA