Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

sample_name
DRS012993
sample comment
ChIP seq library. HEK293 cell line, whole cell extract

Sequenced DNA Library

library_name
HEK293 WCE
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
11407993
Reads aligned (%)
58.9
Duplicates removed (%)
12.5
Number of peaks
95 (qval < 1E-05)

hg19

Number of total reads
11407993
Reads aligned (%)
58.4
Duplicates removed (%)
13.0
Number of peaks
101 (qval < 1E-05)

Base call quality data from DBCLS SRA