Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Digestive tract
Cell type
DLD-1
Primary Tissue
Colon
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS012981
sample comment
ChIP seq library. DLD-1 cell line, H3K27me3 IP

Sequenced DNA Library

library_name
DLD1 H3K27me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
22239266
Reads aligned (%)
53.9
Duplicates removed (%)
55.5
Number of peaks
475 (qval < 1E-05)

hg19

Number of total reads
22239266
Reads aligned (%)
53.1
Duplicates removed (%)
56.0
Number of peaks
513 (qval < 1E-05)

Base call quality data from DBCLS SRA