Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RAD21

Cell type

Cell type Class
Digestive tract
Cell type
DLD-1
Primary Tissue
Colon
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS012980
sample comment
ChIP seq library. DLD-1 cell line,Rad21 IP

Sequenced DNA Library

library_name
DLD1 Rad21
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
61931642
Reads aligned (%)
83.5
Duplicates removed (%)
12.5
Number of peaks
32414 (qval < 1E-05)

hg38

Number of total reads
61931642
Reads aligned (%)
85.7
Duplicates removed (%)
11.0
Number of peaks
32081 (qval < 1E-05)

Base call quality data from DBCLS SRA