Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gata3

Cell type

Cell type Class
Blood
Cell type
Th2 Cells
MeSH Description
A subset of helper-inducer T-lymphocytes which synthesize and secrete the INTERLEUKINS IL-4; IL-5; IL-6; and IL-10. These cytokines influence B-cell development and antibody production as well as augmenting humoral responses.

Attributes by original data submitter

Sample

sample_name
DRS012118
sample comment
3xFlag-tagged Gata3-expressing mouse Th2 cell clone, D10G4.1 cells weresubjected to ChIP-seq analysis for anti-Flag mAb.

Sequenced DNA Library

library_name
3xFlag-GATA3WT antiFlag?
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
16098822
Reads aligned (%)
67.5
Duplicates removed (%)
67.0
Number of peaks
295 (qval < 1E-05)

mm9

Number of total reads
16098822
Reads aligned (%)
67.3
Duplicates removed (%)
67.3
Number of peaks
320 (qval < 1E-05)

Base call quality data from DBCLS SRA